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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8068602 chr17:18209008 C/T LOC162632 chr17:16614993-16707819:+ 0.38 6.3 6.75E-10 Box Plot
THCA rs8068854 chr17:18208969 G/A LOC162632 chr17:16614993-16707819:+ 0.38 6.3 6.75E-10 Box Plot
THCA rs8069321 chr17:18117610 T/C LOC162632 chr17:16614993-16707819:+ 0.35 6.06 2.76E-9 Box Plot
THCA rs8070259 chr17:78993382 A/G LOC100130932 chr19:14599758-14600688:+ -0.26 -7.13 3.66E-12 Box Plot
THCA rs8070259 chr17:78993382 A/G ZMAT2 chr5:140078265-140086261:+ -0.26 -6.12 1.91E-9 Box Plot
THCA rs8071231 chr17:18181794 A/G LOC162632 chr17:16614993-16707819:+ 0.38 6.27 8.24E-10 Box Plot
THCA rs8071834 chr17:18099991 C/T LOC162632 chr17:16614993-16707819:+ -0.34 -6.03 3.23E-9 Box Plot
THCA rs8072549 chr17:67624385 T/C HAP1 chr17:39873994-39890896:- -0.43 -6.22 1.1E-9 Box Plot
THCA rs8073464 chr17:18254110 G/A LOC162632 chr17:16614993-16707819:+ 0.41 6.45 2.71E-10 Box Plot
THCA rs8074444 chr17:18224778 C/T LOC162632 chr17:16614993-16707819:+ 0.36 6.01 3.67E-9 Box Plot
THCA rs8074825 chr17:63855798 C/T BPGM chr7:134331560-134364565:+ 0.33 5.94 5.42E-9 Box Plot
THCA rs8074863 chr17:63855913 A/T BPGM chr7:134331560-134364565:+ 0.33 6 3.84E-9 Box Plot
THCA rs8077687 chr17:15660092 A/G ZNF286B chr17:18561742-18585575:- 0.38 8.08 5.24E-15 Box Plot
THCA rs8082550 chr17:18697547 T/C FAM18B2 chr17:15343525-15466945:- 0.36 5.95 5.09E-9 Box Plot
THCA rs8115712 chr20:4746960 G/A VDAC2 chr10:76969912-76991206:+ -0.25 -5.88 7.88E-9 Box Plot